I am running a 2V Weiand X-cellerator intake with an Edelbrock 4150 throttle body and a 1" spacer between the throttle body and the air cleaner with aftermarket NACA air cleaner and active plenum and my seal is just right. I recall after ordering the intake that it was just a smidge higher than stock, sorry can't recall the exact deck heights front and back.
If you are just starting your build ensure you plan everything out in advance so that each upgrade will fit the final version of where you want to be. All of these intakes are reasonably close in performance but if you are looking for the best street performance I would start with the shortest dual plane intake, especially since you are thinking of rebuilding your 2V heads (which I would personally recommend you stay away from). The aftermarket 2V heads can be found with a closed chamber instead of the open chamber 2V heads our cars come with. A good porter can push 450 hp out of 2V heads but you always run into issues with detonation due to the open chamber and you end up spending so much replacing valves, lifter, etc... that you should consider a complete new 2V set of aluminum heads if you are looking for the most out of your 2V set-up.
I hit 440 hp @ 6000 rpm with this intake on the Dyno using Edelbrock 61629 2V heads without any port work on the heads or the intake manifold, so the potential is there for the 2V set-ups.